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Read and navigate PDFs

Use this guide to read a PDF in Atlas, move through its pages, and verify that citations link to the correct passages.

What this page covers

Learn the reading workflow, PDF viewer controls, page navigation, selection, anchors, and limitations.

Open the PDF

Select the source from the project list. It opens in the middle panel.

If you arrived by selecting a citation in chat, Atlas opens the PDF near the cited passage. Before reading the cited section, confirm that the document title and visible content match the source you expected.

Move through the document

Use the viewer toolbar to:

  • Scroll continuously through pages.
  • Jump to a specific page number.
  • Search for a phrase using the search control.
  • Zoom in or out with the zoom controls.
  • Rotate pages if needed.

For research papers, start with the abstract, introduction, methods, results, limitations, and conclusion. For reports and reference documents, use section headings and tables to locate the evidence you need.

Verify a citation

When a chat answer cites a PDF:

  1. Select the citation badge.
  2. The viewer scrolls to the cited passage and highlights it.
  3. Read the highlighted sentence.
  4. Read the surrounding paragraph for context.
  5. Check whether the passage supports the claim Atlas made.
  6. Look for caveats or qualifications nearby.

A citation is a path to evidence. The passage may support the claim accurately, partially, or in a way that requires interpretation. Reading the surrounding text is how you confirm which it is.

Handle page number differences

PDF file pages and printed page labels often differ. A paper might label its introduction as page 1 even though the file has cover pages before it. Atlas citations use the file page. The printed label remains useful when a paper refers to its own pagination.

When page numbers seem off, search for a phrase from the cited passage to confirm you are on the right page.

Troubleshooting

ProblemWhat to check
Search does not find textThe PDF may be scanned or image-based
Citation opens near but not exactly on the phraseSearch for the phrase on that page to locate it
Viewer is slow to loadLarge PDFs and image-heavy documents take longer to render

Use the PDF viewer controls

The PDF viewer is the main reading and verification surface for imported PDF sources. It lets you inspect the original document behind summaries, maps, and citations.

Core controls

Control or statePurpose
ScrollMove through rendered pages.
Page navigationJump to a specific page or page range.
SearchFind extracted text inside the PDF when available.
Citation jumpOpen a cited location from chat, summary, or another surface.
ZoomMake text or figures readable.
Side panel or split viewCompare the PDF with notes, chat, or maps.

Page numbers and anchors

PDFs can have multiple numbering systems:

  • rendered page index
  • printed page label
  • article page number
  • citation anchor
  • extracted-text location.

These can differ. When verifying a citation, read the opened page and nearby context rather than relying only on a page number.

Search and extraction

PDF search depends on extracted text. Search works best when the PDF contains selectable text. Scanned documents, images, unusual layouts, or poor OCR can reduce search and citation quality.

If a PDF looks readable to you but Atlas cannot search it well, the file may be image-based or structurally difficult to parse.

Verification workflow

  1. Open the answer or summary citation.
  2. Read the cited passage.
  3. Read nearby paragraphs for qualifiers or contradictions.
  4. Check figures, tables, and footnotes if the claim depends on them.
  5. Revise the answer or note if the citation does not support the claim.

When to troubleshoot

Use Troubleshoot source processing when the PDF fails to process, lacks searchable text, opens incorrectly, or produces unreliable citations.

Related documentation

  • Summaries
  • How Atlas extracts source content
  • Troubleshoot source processing

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